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iGEM Blogpost Roundup


Adam Bluestein:

One evident advantage of this compressed evolution is the opportunity, at iGem, for young students to engage directly with the Edisons of synthetic biology, sharing big ideas, tricks of the trade, and free sandwiches with the likes of Tom Knight, Randy Rettberg, Drew Endy, Pam Silver, and George Church (to name a few). How motivating must that be?

Rob Carlson:

iGEM is, at its core, an experiment. As the wiki says, the teams will “all specify, design, build, and test simple biological systems made from standard, interchangeable biological parts.” Of course, as there aren’t yet any standard, interchangeable biological parts, the students are inventing as they go. And inventing is slow, arduous work.

ginkgoo:

Some of the simplest and most interesting work work in human practices was from Peking University in Beijing, China. The team was interested in DIY biology and how easy it is for amateurs and hobbyists to obtain those supplies. They ordered a variety of typical molecular biology supplies like restriction enzymes and DNA purification kits to their homes from companies around China to see which would fulfill an order to a residential address.

I know I missed a ton, add more in the comments!



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E. chromi by Daisy Ginsberg and James King. (via synthesis)
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update: more info on the scatalog

E. chromi by Daisy Ginsberg and James King. (via synthesis)

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update: more info on the scatalog



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iGEM 2009 this weekend was an incredible experience (I was a judge). Over 100 teams from all over the world competed to produce a new synthetic biology project, submit new genetic parts to the registry, and then present it through a wiki, poster, and presentation. All of the teams worked incredibly hard this summer, learning the practice and tools of synthetic biology, and having a lot of fun!
There will be a lot of other blog posts elsewhere on the details of the excellent projects of the winning teams so I wanted to highlight some of the teams that weren’t as successful but did an incredible job starting up not only an iGEM team but actually building a molecular biology lab from scratch at their schools.
The Gaston Day School, a high school in Gastonia, North Carolina became the first high school to independently participate in iGEM (Lincoln High School in San Francisco has been participating with the UCSF team for a few years with great success). The kids built their lab, working long hours all summer on building a biological detector of nitrate contamination in the environment, a serious problem in their community due to runoff from industrial agriculture. They’re hoping to keep at it and come back next year and I hope so too!
City College of San Francisco is the first Junior College team to participate in iGEM. They designed and set up a really interesting solar powered biological fuel cell with the goal of producing self-sustaining electricity. They didn’t have a dedicated lab space, pushing their fuel cell and donated thermocycler around to different rooms on carts, often doing PCR in closets and other less-than-ideal spaces, but despite that they learned a lot about synthetic and molecular biology, built a neat contraption that may some day produce sustainable electricity!
Another great team was ArtScience Bangalore, a group of art and design students from India who worked on a project to make E. coli smell like fresh rain. They started with no experience in science and ended up building their own gel boxes and microscopes, designing a synthetic biology pathway, doing molecular biology experiments, and submitting a new gene to the registry. I’m really excited by the collaborations between artists and scientists that have been going on in synthetic biology and bioengineering, and I hope that more artists will get involved in the future!
Congratulations to all the teams and everyone who participated in iGEM this year! You are all amazing! Keep at it and I hope that there will be more new and inspiring teams next year!

iGEM 2009 this weekend was an incredible experience (I was a judge). Over 100 teams from all over the world competed to produce a new synthetic biology project, submit new genetic parts to the registry, and then present it through a wiki, poster, and presentation. All of the teams worked incredibly hard this summer, learning the practice and tools of synthetic biology, and having a lot of fun!

There will be a lot of other blog posts elsewhere on the details of the excellent projects of the winning teams so I wanted to highlight some of the teams that weren’t as successful but did an incredible job starting up not only an iGEM team but actually building a molecular biology lab from scratch at their schools.

The Gaston Day School, a high school in Gastonia, North Carolina became the first high school to independently participate in iGEM (Lincoln High School in San Francisco has been participating with the UCSF team for a few years with great success). The kids built their lab, working long hours all summer on building a biological detector of nitrate contamination in the environment, a serious problem in their community due to runoff from industrial agriculture. They’re hoping to keep at it and come back next year and I hope so too!

City College of San Francisco is the first Junior College team to participate in iGEM. They designed and set up a really interesting solar powered biological fuel cell with the goal of producing self-sustaining electricity. They didn’t have a dedicated lab space, pushing their fuel cell and donated thermocycler around to different rooms on carts, often doing PCR in closets and other less-than-ideal spaces, but despite that they learned a lot about synthetic and molecular biology, built a neat contraption that may some day produce sustainable electricity!

Another great team was ArtScience Bangalore, a group of art and design students from India who worked on a project to make E. coli smell like fresh rain. They started with no experience in science and ended up building their own gel boxes and microscopes, designing a synthetic biology pathway, doing molecular biology experiments, and submitting a new gene to the registry. I’m really excited by the collaborations between artists and scientists that have been going on in synthetic biology and bioengineering, and I hope that more artists will get involved in the future!

Congratulations to all the teams and everyone who participated in iGEM this year! You are all amazing! Keep at it and I hope that there will be more new and inspiring teams next year!



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Taking Biofuels From the Lab to the Classroom
This is great, a program to allow high school students to do hands-on research in synthetic biology and bioenergy organized through the Joint BioEnergy Institute. I think that synthetic biology has a lot of potential for improving how we teach and learn about biology, as evidenced by the tremendous success of the iGEM program. Even simple techniques in synthetic biology are based on a huge amount of knowledge about how cells cut, copy, and express genes, and about how different enzymes work to do some of the amazing things that bacteria can do (like break down cellulose and produce fuels). The basics of biochemistry and molecular biology are transformed from boring textbook memorization to something literally alive. There’s a big push in the synthetic biology community to abstract these details away, but I think it’s important to remember that synthetic biology is nothing without biology.

Taking Biofuels From the Lab to the Classroom

This is great, a program to allow high school students to do hands-on research in synthetic biology and bioenergy organized through the Joint BioEnergy Institute. I think that synthetic biology has a lot of potential for improving how we teach and learn about biology, as evidenced by the tremendous success of the iGEM program. Even simple techniques in synthetic biology are based on a huge amount of knowledge about how cells cut, copy, and express genes, and about how different enzymes work to do some of the amazing things that bacteria can do (like break down cellulose and produce fuels). The basics of biochemistry and molecular biology are transformed from boring textbook memorization to something literally alive. There’s a big push in the synthetic biology community to abstract these details away, but I think it’s important to remember that synthetic biology is nothing without biology.



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